Tags

GWAS
2013-10-31 PLINK logistic regression - covariant vs interaction
2013-10-21 Association VS. Causal relationships
2013-10-17 Genomic inflation factor and population structure
2013-09-17 IPGWAS
Perl
2013-09-17 IPGWAS
R
2016-02-24 Circos plot
2014-06-03 Represent the number of data pairs (x,y) by using the point size
2014-05-20 R aggregate()
2014-05-12 Examples of using FinCal
2014-05-05 How to set exact number of bins in Histogram in R
2014-04-28 Calculate the mean using selected column(s)
2014-04-22 GitBook build beautiful interactive books using R Markdown and GitHub
2014-04-16 R reading data from Excel, XML and Json
2014-04-15 Add regression line using xyplot
2014-04-15 R order(), sort(), rank()
2014-04-14 Extract R code from Rmd document
2014-04-11 Reorder and relabel boxplot
2014-04-08 Install and Update R and R packages
2014-02-27 data.table outperforms other methods
2014-01-03 Make a Venn Diagram using {VennDiagram}
2014-01-02 data.table introduction
2013-12-31 Statistics One study note
2013-12-16 Two plots with same x axis
2013-12-12 data.table
2013-12-11 Basic R functions
2013-12-07 Divide the first column by the number of each element in the second column
2013-12-05 ddply() in {plyr}
2013-11-25 Download files from internet using R
2013-11-20 plyr arrange(), colwise(), count(), desc()
2013-11-19 plyr transform(), summarise(), ddply()
2013-11-14 Plot Empirical cumulative distribution functions (CDFs)
2013-11-14 Bar plot, pie chart, histgrams and density plot, Scatterplots
2013-11-14 Venn Diagrams with gplots
2013-11-14 Boxplots With Point Identification and Different kind of boxplot
2013-11-13 How many people use my R package during Oct 2013
2013-10-22 How to find out package version in R?
2013-10-16 R Data type
2013-10-08 R Manipulation of Files and Directories
2013-10-05 R Tutorials, Resources and Blogs
2013-10-04 Install and Update R and R packages
2013-10-02 R Regular Expressions
2013-09-18 FinCal
Finance
2014-05-12 Examples of using FinCal
2013-09-18 FinCal
wordcloud
2013-09-19 PubMedWordcloud
PubMed
2013-09-19 PubMedWordcloud
LaTeX
2016-02-25 Creating PDF with Chinese using RMarkdown
2016-02-22 latex in markdown
2013-11-21 Convert Markdown files into PDF via LaTeX using Pandoc
2013-09-30 Font ts1-zi4r at 540 not found
RegExp
2013-10-02 R Regular Expressions
Webpages
2013-11-18 Useful Webpages
2013-10-05 R Tutorials, Resources and Blogs
Bioinformatics
2016-06-27 抓取基因内的所有SNPs
2013-10-10 Updating kgp IDs to rs IDs for SNPs on Illumina HumanOmni2.5M array
Genetics
2014-08-19 Quantification of Relationship Between Allele Frequencies and r squared
2014-05-02 Relation between the odds ratio, relative risk, and baseline risk
2014-04-09 Confounding factor
2013-11-08 Genetic code plot
2013-10-20 Pedigree plot using {kinship2}
BarPlot
2013-10-22 Bar plot in R
GEO
2013-11-10 RMA normalization for microarray data
BoxPlot
2014-04-11 Reorder and relabel boxplot
2013-11-14 Boxplots With Point Identification and Different kind of boxplot
Venn
2014-01-03 Make a Venn Diagram using {VennDiagram}
2013-11-14 Venn Diagrams with gplots
Plot
2016-07-15 ImageJ
2014-06-03 Represent the number of data pairs (x,y) by using the point size
2014-04-15 Add regression line using xyplot
2013-12-16 Two plots with same x axis
2013-11-14 Bar plot, pie chart, histgrams and density plot, Scatterplots
CDF
2013-11-14 Plot Empirical cumulative distribution functions (CDFs)
plyr
2014-04-28 Calculate the mean using selected column(s)
2013-12-07 Divide the first column by the number of each element in the second column
2013-12-05 ddply() in {plyr}
2013-11-27 Formatting plots for publications (ggplot2)
2013-11-20 plyr arrange(), colwise(), count(), desc()
2013-11-19 plyr transform(), summarise(), ddply()
kintr
2014-04-14 Extract R code from Rmd document
2013-11-21 Convert Markdown files into PDF via LaTeX using Pandoc
ggplot2
2016-03-29 Scatterplot with a lot of points
2016-02-19 NBA heatmap plotting by using heatmap, heatmap.2, 3dheatmap and ggplot2
2016-02-16 google scholar citations 2015
2016-01-30 Stacking multiple plots vertically with the same X axis but different Y axes --revised
2016-01-22 用R画中国地图
2016-01-12 Aesthetic mappings and setting of ggplot2
2016-01-11 Stacking multiple plots vertically with the same X axis but different Y axes
2014-10-16 Pair-wise comparisons plot
2014-02-28 ggplot2 Cheatsheet from R for Public Health
2013-11-27 Remove grid and background from plot (ggplot2)
2013-11-27 ggplot2 part 4
2013-11-27 ggplot2 part 3
2013-11-27 ggplot2 part 2
2013-11-27 ggplot2 part 1
2013-11-27 Formatting plots for publications (ggplot2)
Mathematics
2014-02-26 Two Maths Games
2013-12-02 Trigonometric functions and Differentiation Formulas
reshape2
2016-01-30 Stacking multiple plots vertically with the same X axis but different Y axes --revised
2016-01-11 Stacking multiple plots vertically with the same X axis but different Y axes
2014-04-28 Calculate the mean using selected column(s)
2013-12-05 ddply() in {plyr}
database
2014-04-15 Public data
2013-12-10 Hello MySQL
data.table
2014-02-27 data.table outperforms other methods
2014-01-02 data.table introduction
2013-12-12 data.table
Statistics
2016-07-30 statistics for management and economics study notes 4
2016-07-24 statistics for management and economics study notes 3
2016-06-11 statistics for management and economics study notes 2
2016-05-29 statistics for management and economics study notes 1
2016-02-23 Birthday paradox
2014-05-08 Normality test
2014-03-01 Generalized Lambda Distribution GLD
2014-01-22 Linear regression and ANOVA are the Same Analysis?!
2013-12-31 Statistics One study note
C++
2014-03-13 Manage C++ command line options using Boost Program Options
histogram
2016-03-11 set bins and bin width for histogram
2014-05-05 How to set exact number of bins in Histogram in R
aggregate
2014-05-20 R aggregate()
Linux
2016-05-24 bash 大小比较
2016-04-09 vi命令
2016-03-01 linux grep 例子
2016-02-04 linux comm command
2016-02-01 linux cut command
2016-01-17 ssh and scp
2014-10-22 find: search for files or directories hierarchy
2014-10-21 linux ftp command
2014-06-20 shell script one-liners
NGS
2016-03-07 bowtie examples
2016-02-21 BED format and bedtools
2016-02-18 bam sam file format and examples of using samtools
2014-07-03 Coverage of GWAS
Python
2016-06-07 numpy 学习笔记 1
2016-05-09 scrapy simple example 抓取南京邮电大学南邮要闻
2016-05-08 python编程注意事项
2014-10-19 using pip on windows 7
map
2016-01-22 用R画中国地图
table
2016-02-12 formattable example
GoogleScholar
2016-02-16 google scholar citations 2015
heatmap
2016-02-19 NBA heatmap plotting by using heatmap, heatmap.2, 3dheatmap and ggplot2
circos
2016-02-24 Circos plot
RNA-Seq
2016-03-12 tophat + cufflinks
english
2016-07-08 英文email
2016-03-13 工作邮件英文例句
GitHub
2016-06-30 how to delete a tag of GitHub
2016-04-11 create table of content for markdown
pie
2016-04-15 animation of GDP
SurvivalAnalysis
2016-05-05 Survival analysis - Kaplan-Meier Curve
ImageJ
2016-07-15 ImageJ